The Wily DNA Editor

The Wily DNA Editor master DNA sequences, plasmids and restriction enzyme digests	GEAR	Source Code
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Hits: -     Name: Sequence:
        Methylation:
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Ambiguity Codes:
R = [GA]; Y = [CT]; M = [AC]; K = [GT]; S = [GC]; W = [AT]; B = not A, [CGT]; D = not C, [AGT]; H = not G, [ACT]; V = not T, [ACG]; N = [ACGT]

Hits	Name	Sequence	Hits	Name	Sequence	Hits	Name	Sequence
-	AatII	GACGT^C	-	BsrFI	R^CCGGY	-	MseI	T^TAA
-	AccI	GT^MKAC	-	BsrGI	T^GTACA	-	MslI	CAYNN^NNRTG
-	Acc65I	G^GTACC	-	BssHII	G^CGCGC	-	MspI	C^CGG
-	AciI	CCGC(-3/-1)	-	BssSI	CACGAG(-5/-1)	-	MspA1I	CMG^CKG
-	AclI	AA^CGTT	-	BstAPI	GCANNNN^NTGC	-	MunI	C^AATTG
-	AcuI	CTGAAG(16/14)	-	BstBI	TT^CGAA	-	MvaI	CC^WGG
-	AfeI	AGC^GCT	-	BstEII	G^GTNACC	-	MvnI	CG^CG
-	AflII	C^TTAAG	-	BstNI	CC^WGG	-	MwoI	GCNNNNN^NNGC
-	AflIII	A^CRYGT	-	BstUI	CG^CG	-	NaeI	GCC^GGC
-	AgeI	A^CCGGT	-	BstXI	CCANNNNN^NTGG	-	NarI	GG^CGCC
-	AhdI	GACNNN^NNGTC	-	BstYI	R^GATCY	-	NciI	CC^SGG
-	AleI	CACNN^NNGTG	-	BstZ17I	GTA^TAC	-	NcoI	C^CATGG
-	AluI	AG^CT	-	Bsu36I	CC^TNAGG	-	NdeI	CA^TATG
-	AlwI	GGATC(4/5)	-	BtgI	C^CRYGG	-	NdeII	^GATC
-	AlwNI	CAGNNN^CTG	-	BtgZI	GCGATG(10/14)	-	NgoMIV	G^CCGGC
-	ApaI	GGGCC^C	-	BtsI	GCAGTG(2/0)	-	NheI	G^CTAGC
-	ApaLI	G^TGCAC	-	BtsIMutI	CAGTG(2/0)	-	NlaIII	CATG^
-	ApeKI	G^CWGC	-	BtsCI	GGATG(2/0)	-	NlaIV	GGN^NCC
-	ApoI	R^AATTY	-	Cac8I	GCN^NGC	-	NmeAIII	GCCGAG(21/19)
-	AscI	GG^CGCGCC	-	CfoI	GCG^C	-	NotI	GC^GGCCGC
-	AseI	AT^TAAT	-	ClaI	AT^CGAT	-	NruI	TCG^CGA
-	AsiSI	GCGAT^CGC	-	CviAII	C^ATG	-	NsiI	ATGCA^T
-	Asp700I	GAANN^NNTTC	-	CviQI	G^TAC	-	NspI	RCATG^Y
-	Asp718I	G^GTACC	-	DdeI	C^TNAG	-	PacI	TTAAT^TAA
-	AvaI	C^YCGRG	-	DpnI	GA^TC	-	PaeR7I	C^TCGAG
-	AvaII	G^GWCC	-	DpnII	^GATC	-	PciI	A^CATGT
-	AvrII	C^CTAGG	-	DraI	TTT^AAA	-	PflFI	GACN^NNGTC
-	BaeGI	GKGCM^C	-	DraIII	CACNNN^GTG	-	PflMI	CCANNNN^NTGG
-	BamHI	G^GATCC	-	DrdI	GACNNNN^NNGTC	-	PleI	GAGTC(4/5)
-	BanI	G^GYRCC	-	EaeI	Y^GGCCR	-	PluTI	GGCGC^C
-	BanII	GRGCY^C	-	EagI	C^GGCCG	-	PmeI	GTTT^AAAC
-	BbrPI	CAC^GTG	-	EarI	CTCTTC(1/4)	-	PmlI	CAC^GTG
-	BbsI	GAAGAC(2/6)	-	EciI	GGCGGA(11/9)	-	PpuMI	RG^GWCCY
-	BbvI	GCAGC(8/12)	-	Eco47III	AGC^GCT	-	PshAI	GACNN^NNGTC
-	BbvCI	CCTCAGC(-5/-2)	-	EcoNI	CCTNN^NNNAGG	-	PsiI	TTA^TAA
-	BccI	CCATC(4/5)	-	EcoO109I	RG^GNCCY	-	PspGI	^CCWGG
-	BceAI	ACGGC(12/14)	-	EcoP15I	CAGCAG(25/27)	-	PspOMI	G^GGCCC
-	BciVI	GTATCC(6/5)	-	EcoRI	G^AATTC	-	PspXI	VC^TCGAGB
-	BclI	T^GATCA	-	EcoRV	GAT^ATC	-	PstI	CTGCA^G
-	BcoDI	GTCTC(1/5)	-	Eco53kI	GAG^CTC	-	PvuI	CGAT^CG
-	BfaI	C^TAG	-	FatI	^CATG	-	PvuII	CAG^CTG
-	BfrI	C^TTAAG	-	FauI	CCCGC(4/6)	-	RsaI	GT^AC
-	BfuAI	ACCTGC(4/8)	-	Fnu4HI	GC^NGC	-	RsrII	CG^GWCCG
-	BfuCI	^GATC	-	FokI	GGATG(9/13)	-	SacI	GAGCT^C
-	BglI	GCCNNNN^NGGC	-	FseI	GGCCGG^CC	-	SacII	CCGC^GG
-	BglII	A^GATCT	-	FspI	TGC^GCA	-	SalI	G^TCGAC
-	BlnI	C^CTAGG	-	HaeII	RGCGC^Y	-	SapI	GCTCTTC(1/4)
-	BlpI	GC^TNAGC	-	HaeIII	GG^CC	-	Sau96I	G^GNCC
-	BmgBI	CACGTC(-3/-3)	-	HgaI	GACGC(5/10)	-	Sau3AI	^GATC
-	BmrI	ACTGGG(5/4)	-	HhaI	GCG^C	-	SbfI	CCTGCA^GG
-	BmtI	GCTAG^C	-	HinP1I	G^CGC	-	ScaI	AGT^ACT
-	BpmI	CTGGAG(16/14)	-	HincII	GTY^RAC	-	ScrFI	CC^NGG
-	Bpu10I	CCTNAGC(-5/-2)	-	HindII	GTY^RAC	-	SexAI	A^CCWGGT
-	BpuEI	CTTGAG(16/14)	-	HindIII	A^AGCTT	-	SfaNI	GCATC(5/9)
-	BsaI	GGTCTC(1/5)	-	HinfI	G^ANTC	-	SfcI	C^TRYAG
-	BsaAI	YAC^GTR	-	HpaI	GTT^AAC	-	SfoI	GGC^GCC
-	BsaBI	GATNN^NNATC	-	HpaII	C^CGG	-	SfuI	TT^CGAA
-	BsaHI	GR^CGYC	-	HphI	GGTGA(8/7)	-	SgrAI	CR^CCGGYG
-	BsaJI	C^CNNGG	-	Hpy99I	CGWCG^	-	SmaI	CCC^GGG
-	BsaWI	W^CCGGW	-	Hpy166II	GTN^NAC	-	SmlI	C^TYRAG
-	BsaXI	(9/12)ACNNNNNCTCC(10/7)	-	Hpy188I	TCN^GA	-	SnaBI	TAC^GTA
-	BseRI	GAGGAG(10/8)	-	Hpy188III	TC^NNGA	-	SpeI	A^CTAGT
-	BseYI	CCCAGC(-5/-1)	-	HpyAV	CCTTC(6/5)	-	SphI	GCATG^C
-	BsgI	GTGCAG(16/14)	-	HpyCH4III	ACN^GT	-	SrfI	GCCC^GGGC
-	BsiEI	CGRY^CG	-	HpyCH4IV	A^CGT	-	SspI	AAT^ATT
-	BsiHKAI	GWGCW^C	-	HpyCH4V	TG^CA	-	StuI	AGG^CCT
-	BsiWI	C^GTACG	-	KasI	G^GCGCC	-	StyI	C^CWWGG
-	BslI	CCNNNNN^NNGG	-	KpnI	GGTAC^C	-	StyD4I	^CCNGG
-	BsmI	GAATGC(1/-1)	-	KspI	CCGC^GG	-	SwaI	ATTT^AAAT
-	BsmAI	GTCTC(1/5)	-	MaeI	C^TAG	-	TaqI	T^CGA
-	BsmBI	CGTCTC(1/5)	-	MaeII	A^CGT	-	TfiI	G^AWTC
-	BsmFI	GGGAC(10/14)	-	MaeIII	^GTNAC	-	Tru9I	T^TAA
-	BsoBI	C^YCGRG	-	MboI	^GATC	-	TseI	G^CWGC
-	Bsp1286I	GDGCH^C	-	MboII	GAAGA(8/7)	-	Tsp45I	^GTSAC
-	BspCNI	CTCAG(9/7)	-	MfeI	C^AATTG	-	TspMI	C^CCGGG
-	BspDI	AT^CGAT	-	MluI	A^CGCGT	-	TspRI	CASTGNN^
-	BspEI	T^CCGGA	-	MluCI	^AATT	-	Tth111I	GACN^NNGTC
-	BspHI	T^CATGA	-	MluNI	TGG^CCA	-	XbaI	T^CTAGA
-	BspMI	ACCTGC(4/8)	-	MlyI	GAGTC(5/5)	-	XhoI	C^TCGAG
-	BspQI	GCTCTTC(1/4)	-	MmeI	TCCRAC(20/18)	-	XmaI	C^CCGGG
-	BsrI	ACTGG(1/-1)	-	MnlI	CCTC(7/6)	-	XmnI	GAANN^NNTTC
-	BsrBI	CCGCTC(-3/-3)	-	MroI	T^CCGGA	-	ZraI	GAC^GTC
-	BsrDI	GCAATG(2/0)	-	MscI	TGG^CCA

DNA Load per Lane: ng

Marker (bp,ng):

Genetic Code:
Amino Acids:    Translate:    Show Reverse Complement:
          Min ORF Length: As

		2nd Letter
		U	C	A	G
1st Letter	U	UUU - Phe	UCU - Ser	UAU - Tyr	UGU - Cys	U	3rd Letter
		UUC - Phe	UCC - Ser	UAC - Tyr	UGC - Cys	C
		UUA - Leu	UCA - Ser	UAA - ***	UGA - ***	A
		UUG - Leu	UCG - Ser	UAG - ***	UGG - Trp	G
	C	CUU - Leu	CCU - Pro	CAU - His	CGU - Arg	U
		CUC - Leu	CCC - Pro	CAC - His	CGC - Arg	C
		CUA - Leu	CCA - Pro	CAA - Gln	CGA - Arg	A
		CUG - Leu	CCG - Pro	CAG - Gln	CGG - Arg	G
	A	AUU - Ile	ACU - Thr	AAU - Asn	AGU - Ser	U
		AUC - Ile	ACC - Thr	AAC - Asn	AGC - Ser	C
		AUA - Ile	ACA - Thr	AAA - Lys	AGA - Arg	A
		AUG - Met	ACG - Thr	AAG - Lys	AGG - Arg	G
	G	GUU - Val	GCU - Ala	GAU - Asp	GGU - Gly	U
		GUC - Val	GCC - Ala	GAC - Asp	GGC - Gly	C
		GUA - Val	GCA - Ala	GAA - Glu	GGA - Gly	A
		GUG - Val	GCG - Ala	GAG - Glu	GGG - Gly	G

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Qualifiers: See Features / Qualifiers Documentation

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